Department of Medical Statistics, University Goettingen

Florian Auer


WG Statistical Bioinformatics
Phone:
0551-39-10709
Telefax:
0551-39-4995
E-Mail:
Florian.Auer@med.uni-goettingen.de
Office room:
Humboldtallee 32, GF, 136

Research interests

Software/Web-Applications


Short biography

Since 04/2016 PhD student at the Department of Medical Statistics, UMG, Göttingen
"A knowledge base for generating patient-specific pathways for individualized treatment decisions in clinical applications"
2014 Diploma in Bioinformatics at the Ludwig-­Maximilians-­Universität and the Technische Universität München, Munich
"Meta Analysis of Larger Scale Protein Expression Profiles"

Publications

[4] ndexr - an R package to interface with the Network Data Exchange.
Auer F, Hammoud Z, Ishkin A, Pratt D, Ideker T, Kramer F.
Bioinformatics. 2017 Oct 26. doi: 10.1093/bioinformatics/btx683. [ Bioinformatics/PubMed]
[3] Global Proteome Analysis of the NCI-60 Cell Line Panel
Moghaddas Gholami A, Hahne H, Wu Z, Auer FJ, Meng C, Wilhelm M, Kuster B
Cell Reports 2013; Vol. 4, Issue 3 pp. 609-620 doi:10.1016/j.celrep.2013.07.018 [Abstract]
[2] A large-scale evaluation of computational protein function prediction
Radivojac P, [...] Auer F, [...] Friedberg I Radivojac P, Clark W T, Oron T R, Schnoes A M, Wittkop T, Sokolov A, Graim K, Funk C, Verspoor K, Ben-Hur A, Pandey G, Yunes J M, Talwalkar A S, Repo S, Souza M L, Piovesan D, Casadio R, Wang Z, Cheng J, Fang H, Gough J, Koskinen P, Toronen P, Nokso-Koivisto J, Holm L, Cozzetto D, Buchan D W A, Bryson K, Jones D T, Limaye B, Inamdar H, Datta A, Manjari S K, Joshi R, Chitale M, Kihara D, Lisewski A M, Erdin S, Venner E, Lichtarge O, Rentzsch R, Yang H, Romero A E, Bhat P, Paccanaro A, Hamp T, Kaszner R, Seemayer S, Vicedo E, Schaefer C, Achten D, Auer F, Boehm A, Braun T, Hecht M, Heron M, Honigschmid P, Hopf T A, Kaufmann S, Kiening M, Krompass D, Landerer C, Mahlich Y, Roos M, Bjorne J, Salakoski T, Wong A, Shatkay H, Gatzmann F, Sommer I, Wass M N, Sternberg M J E, Skunca N, Supek F, Bosnjak M, Panov P, Dzeroski S, Smuc T, Kourmpetis Y A I, van Dijk A D J , Braak C J F ter, Zhou Y, Gong Q, Dong X, Tian W, Falda M, Fontana P, Lavezzo E, Di Camillo B, Toppo S, Lan L, Djuric N, Guo Y, Vucetic S, Bairoch A, Linial M, Babbitt P, Brenner S, Orengo C, Rost B, Mooney S D, Friedberg I Nature Methods 2013; 10, 221-227 doi:10.1038/nmeth.2340 [Abstract]
[1] Homology-based inference sets the bar high for protein function prediction
Hamp T, Kassner R, Seemayer S, Vicedo E, Schaefer C, Achten D, Auer F, Boehm A, Braun T, Hecht M, Heron M, Hönigschmid P, Hopf T A, Kaufmann S, Kiening M, Krompass D, Landerer C, Mahlich Y, Roos M, Rost B
BMC Bioinformatics 2013; 14(Suppl 3):S7 doi:10.1186/1471-2105-14-S3-S7 [Abstract]

Poster